MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Streptococcus danieliae
STR.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 263
bases: 1,967,238 bps
CDS: 1,829
rRNA: 7
Repeat region:
tmRNA: 1
tRNA: 72
misc RNA:
Total features: 1,909
Total number of protein coding genes annotated/found:
1,829
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5003|JADGKG010000146.1
SEQF5003_01909
Genome Viewer
NA
AA
708/236
31531-32238
hypothetical protein
SEQF5003|JADGKG010000146.1
SEQF5003_01908
Genome Viewer
NA
AA
1122/374
30185-31306
hypothetical protein
SEQF5003|JADGKG010000146.1
SEQF5003_01907
Genome Viewer
NA
AA
825/275
29340-30164
Membrane protein insertase YidC 2
SEQF5003|JADGKG010000146.1
SEQF5003_01906
Genome Viewer
NA
AA
366/122
28997-29362
Ribonuclease P protein component
SEQF5003|JADGKG010000146.1
SEQF5003_01905
Genome Viewer
NA
AA
5715/1905
23152-28866
hypothetical protein
SEQF5003|JADGKG010000146.1
SEQF5003_01904
Genome Viewer
NA
AA
12618/4206
10308-22925
hypothetical protein
SEQF5003|JADGKG010000146.1
SEQF5003_01903
Genome Viewer
NA
AA
1464/488
8549-10012
Glutamate--tRNA ligase
SEQF5003|JADGKG010000146.1
SEQF5003_01902
Genome Viewer
NA
AA
273/91
8234-8506
hypothetical protein
SEQF5003|JADGKG010000146.1
SEQF5003_01901
Genome Viewer
NA
AA
477/159
7754-8230
2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase
SEQF5003|JADGKG010000146.1
SEQF5003_01900
Genome Viewer
NA
AA
654/218
7101-7754
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
SEQF5003|JADGKG010000146.1
SEQF5003_01899
Genome Viewer
NA
AA
1362/454
5743-7104
DNA repair protein RadA
SEQF5003|JADGKG010000146.1
SEQF5003_01898
Genome Viewer
NA
AA
444/148
5291-5734
Deoxyuridine 5'-triphosphate nucleotidohydrolase
SEQF5003|JADGKG010000146.1
SEQF5003_01897
Genome Viewer
NA
AA
900/300
5076-4177
Putative two-component membrane permease complex subunit SMU_747c
SEQF5003|JADGKG010000146.1
SEQF5003_01896
Genome Viewer
NA
AA
804/268
4180-3377
Putative two-component membrane permease complex subunit SMU_746c
SEQF5003|JADGKG010000146.1
SEQF5003_01895
Genome Viewer
NA
AA
453/151
2679-2227
IS256 family transposase ISSdy3
SEQF5003|JADGKG010000146.1
SEQF5003_01894
Genome Viewer
NA
AA
693/231
2196-1504
IS256 family transposase ISSag11
SEQF5003|JADGKG010000146.1
SEQF5003_01893
Genome Viewer
NA
AA
441/147
895-1335
IS1380 family transposase ISSpn5
SEQF5003|JADGKG010000146.1
SEQF5003_01892
Genome Viewer
NA
AA
351/117
356-6
hypothetical protein
SEQF5003|JADGKG010000032.1
SEQF5003_01891
Genome Viewer
NA
AA
447/149
5921-5475
Flavodoxin
SEQF5003|JADGKG010000032.1
SEQF5003_01890
Genome Viewer
NA
AA
1503/501
5346-3844
hypothetical protein
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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